#radcamps

[evoldir]

Fwd: Workshop: ColumbiaU_NewYork.RadCamp2023.May12-13-Jun11-12

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Workshop: ColumbiaU_NewYork.RadCamp2023.May12-13-Jun11-12 > Date: 19 November 2022 at 05:40:31 GMT > To: rdmpage@gmail.com > > > The RADcamp organizers are hosting an interactive two-part RADseq wet > lab and bioinformatic processing workshop designed to guide > participants through a full RADseq pilot study. It will take place > over two days each during two weeks at Columbia University (May 12-13 > and June 11-12). In part 1 (in-person attendance required), > participants will each use 25-35 of their own project’s DNA > extractions to be used in an interactive 2-day wet-lab workshop where > we will prepare dual digest RAD-seq libraries (3RAD). At the end of > the first meeting, libraries will be sent for paired-end Illumina > sequencing. The sequencing cost will be completely subsidized (FREE!). > Part 2 of the workshop (optionally hybrid/remote participation) takes > place one month later and will focus on reproducible bioinformatic > assembly and analysis of participants' pilot RAD-seq data sets using > ipyrad. > > This workshop is intended as a bootcamp for early career scientists to > learn best practices that they can then help to disseminate to the > broader community. This was made possible through generous funding > from the American Genetic Association, Columbia University, and the > Maine Center for Genetics in the Environment at University of Maine. > > We encourage all scientists to submit their application. We especially > welcome women, under-represented minorities, early stage students, or > people with the potential to pass on skills to large groups.  Partial > funding support (need-based) for travel and accommodations in NYC is > available, which can be applied for in the workshop application. A > registration fee ($30 per part) will be due upon acceptance. > > The Full Call for Participation can be found here: > https://ift.tt/5riJIzS > The application for participation can be found here: > https://ift.tt/C5L1RDN. > Application review will begin on December 15 and continue until all > spots are filled. > > Please contact us at radcamp.nyc@gmail.com with any questions. > > > Sandra Hoffberg, Code Ocean > Isaac Overcast, The University of Maine > Deren Eaton, Columbia University > Natalia Bayona Vasquez, Oxford College of Emory University > > > Natalia Bayona

[creativemode]

A lot of people don’t know what occupational therapy is. That’s because we do so much! One thing we do is facilitate individuals to participate in meaningful activities. Here’s one example.

This is Christine: a passionate advocate for augmentative communication devices with a big heart. She loves the 3e love heart wheelchair logo, as their mission is to change the perception of disability.

Christine also loves RAD camp, a week long summer camp for adults and children with disabilities. They have a variety of classes and activities throughout the day, including art class. Some of the art projects are personalizing projects and adding that bit of individual flair.

Even though I was not participating in camp as an occupational therapist, my brain has a difficult time looking at the world through any other lens. As an OT, I look at the activity and break down the requirements needed in order to be successful. I assess the person’s abilities and find compensatory strategies or assistive devices that can help achieve the goal of creating a meaningful camp artifact that reflects her personality and highlights her ability.

Christine and I worked together to design a stencil that she could use for multiple projects. I took a piece of construction paper, covered it in clear packing tape for stability and washability, and made a wheelchair heart logo stencil. We problem-solved the rest of the task together, so that she would be the one creating the art. We used the stencil all week long to decorate art and journal projects.

I love occupational therapy because we create solutions for everyday life!

[bendlife]

🍉👍🏽😃 @radcamps ・・・ 🍉 Watermelon break! 🍉 #nochildleftinside #theradlife #radcamps #bend0regon #bendoregon #thebendlife

[caramellody]

CAMP CAMP SEASON 3 FINALE LIVEBLOG

as usual SPOILER under the cut

-w-wait. They all just. LEFT MAX ALONE???

-FLASHBACK TIME

-CENTER NEIL TELLING DAVID TO FUCK OFF? WOW THIS EPISODES GOING GREAT

-“are you our new mom?” SPACE KID

-Gwen managed to at least get a job

-“does this mean we all have to split up?” nikki...

- to the future oh okay. At least davids here….

-“what fun is adventuring without you guys?” NIKKI

-oh oh no. Max is pushing them away. He wants them to be happy. And im pretty sure he thinks that they're better off without him D:

-MAX

-oh. Sup Campbell

-oh. Oh wow. Campbell

-max. Max honey aren't you being a little hypocritical here? Like i get it. Campbell isn't the best man in the world. But you quite literately PUSHED YOUR OWN FRIENDS AWAY a few minutes ago

-oh shit. Campbell redemption arc? He's still shitty but hmmmm hes so much more woke than max is at this point im starting to think it so.

-its impressive that David had all the birds and balloons planned for. A while

- “mr.campbell” GO GET HIM DAVEY

-“happy reunion.” Max honey you're awful but i love you

-oh, shoot a Campbell-max-David dynamic trio??? 

-aww.

-FUCK THIS JOB. GWEN I LOVE YOU

-QUARTERMASTER

-getting the gang all back together

-jonman radcamp.

-the quest part 1: going for harrison

-HARRISON. GET

- its such a weird and roundabout loving camp this is why i love this fucking camp

-OH MY GOD IS THIS A THIS IS AMERICA PARODY???

-I LOVE THIS

-“rules? Lets burn this fucker down” nurf i love you

-oh my god. Nikki and neil are the troubed kids

-max. Just apologize. Max. Max. Just apologize.

- all the CHAOS

-Kfjdjejejekejejdej rip i had hopes. But you know it be like that sometimes.

-MAX FEELING GUILTY CAUSE THAT'S WHAT HE DID TO NIKKI AND NEIL. MAX PLEASE JUST APOLOGIZE

-HE DID IT

-oh shoot. Oh my god. campbell actually turned himself in!

-THE MILLERS

-“hey dads” “hi sweetie” we don’t deserve Ered and the millers

-oh my good COMMUNITY SERVICE

-WELCOME TO SUMMER CAMP ASSHOLE

-It’s such a sweet episode. I love it so much.

-Well its time for the wait to begin for the Halloween special

[evoldir]

Fwd: Workshop: ColumbiaU_NewYork.RadCamp2023.May12-13-Jun11-12

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Workshop: ColumbiaU_NewYork.RadCamp2023.May12-13-Jun11-12 > Date: 19 November 2022 at 05:40:31 GMT > To: rdmpage@gmail.com > > > The RADcamp organizers are hosting an interactive two-part RADseq wet > lab and bioinformatic processing workshop designed to guide > participants through a full RADseq pilot study. It will take place > over two days each during two weeks at Columbia University (May 12-13 > and June 11-12). In part 1 (in-person attendance required), > participants will each use 25-35 of their own project’s DNA > extractions to be used in an interactive 2-day wet-lab workshop where > we will prepare dual digest RAD-seq libraries (3RAD). At the end of > the first meeting, libraries will be sent for paired-end Illumina > sequencing. The sequencing cost will be completely subsidized (FREE!). > Part 2 of the workshop (optionally hybrid/remote participation) takes > place one month later and will focus on reproducible bioinformatic > assembly and analysis of participants' pilot RAD-seq data sets using > ipyrad. > > This workshop is intended as a bootcamp for early career scientists to > learn best practices that they can then help to disseminate to the > broader community. This was made possible through generous funding > from the American Genetic Association, Columbia University, and the > Maine Center for Genetics in the Environment at University of Maine. > > We encourage all scientists to submit their application. We especially > welcome women, under-represented minorities, early stage students, or > people with the potential to pass on skills to large groups.  Partial > funding support (need-based) for travel and accommodations in NYC is > available, which can be applied for in the workshop application. A > registration fee ($30 per part) will be due upon acceptance. > > The Full Call for Participation can be found here: > https://ift.tt/5riJIzS > The application for participation can be found here: > https://ift.tt/C5L1RDN. > Application review will begin on December 15 and continue until all > spots are filled. > > Please contact us at radcamp.nyc@gmail.com with any questions. > > > Sandra Hoffberg, Code Ocean > Isaac Overcast, The University of Maine > Deren Eaton, Columbia University > Natalia Bayona Vasquez, Oxford College of Emory University > > > Natalia Bayona

[evoldir]

Fwd: Course: Marseilles.RADCamp.Oct7-10

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Course: Marseilles.RADCamp.Oct7-10 > Date: 5 July 2020 at 06:52:00 BST > To: rdmpage@gmail.com > Reply-To: brian@helix.biology.mcmaster.ca > > > Dear all, > > over the last 10 years, there was a huge development of studies using > restriction site associated DNA sequencing (RAD-Seq) in molecular > ecology, population genetics, molecular phylogenetics and species > delineation. RAD-Seq datasets provide sub-genomic sampling at the scale > of thousands or tens of thousands of genome wide loci. These larger > datasets provide more robust phylogenetic estimates, finer scale > population delineation, information about adaptive variation, and can > provide additional sources of information such as evidence of historical > introgression. The process of organizing and making sense of the vast > quantities of reads that come back off a sequencing instrument is > non-trivial, and of great consequence. > > RADCamp workshops are designed to introduce ipyrad > (https://ift.tt/2Z0pza4), a unified and self-contained > RAD-Seq assembly and analysis framework, which emphasizes simplicity, > performance, and reproducibility. In these workshops we proceed through > all the steps necessary to quality control and assemble a typical > RAD-Seq dataset, including pre- and post-assembly data filtering. > Additionally, we introduce the ipyrad ‘analysis’ API which provides a > powerful, simple, and reproducible interface to several widely used > methods for inferring phylogenetic relationships, population structure, > and admixture. > > More information available here: https://ift.tt/3f1iZp3 > > RADCamp workshops are normally geared toward practicing field biologists > with little or no computational experience. Workshop attendees will need > to bring a laptop computer, and their own RAD data if they have some. > > The next session of the RADCamp will take place in Marseilles (Provence, > France) from October 7th to October 10th. The first two days will be > dedicated to training per se. The third day is optional and will be kept > for any additional requested instruction, open discussions, and guided > help with empirical data assembly. > > More precisely the training will take place at the Luminy campus, inside > the Calanques National Park : https://ift.tt/1mgUVDl. > This session is funded by the Eccorev Research Federation, the > Environmental Genomics Research Group, the IMBE laboratory and the > Aix-Marseille University. > > There are no registration fees, and participants should manage on their > own for accomodations. Only lunches will be provided. The number of > participants is limited to 20. If you are interested please send a mail > to radcamp2020@osupytheas.fr with a short CV, and a description of your > project(s) with RAD sequencing. > > Thanks > > The organising commitee, > > Joana Boavida, Alex Baumel, Didier Aurelle, Isaac Overcast > > > > -- > > *Didier AURELLE* > > *Courriel: didier.aurelle(at)univ-amu.fr / > didier.aurelle(at)mio.osupytheas.fr* > > Maître de Conférences > *Aix-Marseille Université / Institut Pythéas* > MIO / Institut Méditerranéen d'Océanologie > UMR AMU / CNRS / IRD > > Campus de Luminy – OCEANOMED > Bâtiment Pacifique > 13288 MARSEILLE cedex 09 FRANCE > > > > Didier AURELLE > via IFTTT

[evoldir]

Fwd: Course: Marseilles.RADCamp.Oct7-10

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Course: Marseilles.RADCamp.Oct7-10 > Date: 5 July 2020 at 06:52:00 BST > To: rdmpage@gmail.com > > > Dear all, > > over the last 10 years, there was a huge development of studies using > restriction site associated DNA sequencing (RAD-Seq) in molecular > ecology, population genetics, molecular phylogenetics and species > delineation. RAD-Seq datasets provide sub-genomic sampling at the scale > of thousands or tens of thousands of genome wide loci. These larger > datasets provide more robust phylogenetic estimates, finer scale > population delineation, information about adaptive variation, and can > provide additional sources of information such as evidence of historical > introgression. The process of organizing and making sense of the vast > quantities of reads that come back off a sequencing instrument is > non-trivial, and of great consequence. > > RADCamp workshops are designed to introduce ipyrad > (https://ift.tt/2Z0pza4), a unified and self-contained > RAD-Seq assembly and analysis framework, which emphasizes simplicity, > performance, and reproducibility. In these workshops we proceed through > all the steps necessary to quality control and assemble a typical > RAD-Seq dataset, including pre- and post-assembly data filtering. > Additionally, we introduce the ipyrad ‘analysis’ API which provides a > powerful, simple, and reproducible interface to several widely used > methods for inferring phylogenetic relationships, population structure, > and admixture. > > More information available here: https://ift.tt/3f1iZp3 > > RADCamp workshops are normally geared toward practicing field biologists > with little or no computational experience. Workshop attendees will need > to bring a laptop computer, and their own RAD data if they have some. > > The next session of the RADCamp will take place in Marseilles (Provence, > France) from October 7th to October 10th. The first two days will be > dedicated to training per se. The third day is optional and will be kept > for any additional requested instruction, open discussions, and guided > help with empirical data assembly. > > More precisely the training will take place at the Luminy campus, inside > the Calanques National Park : https://ift.tt/1mgUVDl. > This session is funded by the Eccorev Research Federation, the > Environmental Genomics Research Group, the IMBE laboratory and the > Aix-Marseille University. > > There are no registration fees, and participants should manage on their > own for accomodations. Only lunches will be provided. The number of > participants is limited to 20. If you are interested please send a mail > to radcamp2020@osupytheas.fr with a short CV, and a description of your > project(s) with RAD sequencing. > > Thanks > > The organising commitee, > > Joana Boavida, Alex Baumel, Didier Aurelle, Isaac Overcast > > > > -- > > *Didier AURELLE* > > *Courriel: didier.aurelle(at)univ-amu.fr / > didier.aurelle(at)mio.osupytheas.fr* > > Maître de Conférences > *Aix-Marseille Université / Institut Pythéas* > MIO / Institut Méditerranéen d'Océanologie > UMR AMU / CNRS / IRD > > Campus de Luminy – OCEANOMED > Bâtiment Pacifique > 13288 MARSEILLE cedex 09 FRANCE > > > > Didier AURELLE > via IFTTT

[evoldir]

Fwd: Workshop: ULisbon.RADseqDataAnalysis.Jan22

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Workshop: ULisbon.RADseqDataAnalysis.Jan22 > Date: 28 December 2019 at 06:33:19 GMT > To: rdmpage@gmail.com > > > > Call for participation in the 1st Lisbon Area RADCamp workshop presented by > cE3c at the University of Lisbon. > > This one day workshop is designed to guide participants through the full > bioinformatic processing of RADSeq data, taking raw data all the way > through downstream analysis. We will introduce RADseq assembly in ipyrad ( > https://ift.tt/2QrOfCH), phylogenetic and population genetic > methods, high performance computing, basic unix command line and python > programming, and jupyter notebooks to promote reproducible science. We will > make extensive use of the ipyrad กanalysisข API which provides a powerful, > simple, and reproducible interface to several widely used methods for > inferring phylogenetic relationships, population structure, and > admixture. > > This workshop is geared toward practicing empirical biologists, so no > previous experience with command line interface or bioinformatics is > required. The workshop will be presented over the course of one full day > (January 22, 2020) at the University of Lisbon. The preliminary schedule is > available on the RADCamp website. > > This workshop is _free_, but registration is mandatory. Participation will > be limited to 32 individuals. Registration deadline is January 17, 2020. > The registration link is available on the RADCamp Lisbon website: > > https://ift.tt/2sgd1hf. > > RADCamp Lisbon 2020 Organizing Committee > > Dr Isaac Overcast (Ecole Normale Superieure, Paris) > Dr Francisco Pina Martins (Universidade de Lisboa) > > isaac.overcast@gmail.com > via IFTTT

[evoldir]

Fwd: Workshop: NYC.RADseqDataGenerationAndAnalysis.Sept14-15_Oct12-13

Begin forwarded message: > From: evoldir@evol.biology.mcmaster.ca > Subject: Workshop: NYC.RADseqDataGenerationAndAnalysis.Sept14-15_Oct12-13 > Date: 11 July 2019 at 16:49:09 GMT+10 > To: rdmpage@gmail.com > > > --00000000000088f309058d558df0 > Content-Type: text/plain; charset="UTF-8" > Content-Transfer-Encoding: quoted-printable > > Call for participation in the 2nd New York Area RADCamp workshop presented > by the Eaton Lab at Columbia University. > > This two-part workshop is designed to guide participants through a full > RADseq pilot study, including library prep (lab methods), DNA sequencing, > and bioinformatics. In Part I, we will introduce RADseq methods, explain > common pitfalls, demonstrate, and generate 3RAD libraries. Participants > will have the option of bringing 10-20 of their own extracted DNA samples > and preparing libraries. Samples prepared during the workshop will be sent > for paired-end Illumina sequencing to generate ~1M reads per sample.  The > sequencing cost will be completely subsidized (free!) by generous funding > from the Society for the Study of Evolution, the Society of Systematic > Biologists, Columbia University, and The City College of New York. During > the second weekend, we will introduce RADseq assembly in ipyrad, > phylogenetic and population genetic methods, high performance computing, > basic unix command line and python programming, and jupyter notebooks to > promote reproducible science. Participants will have the opportunity to > assemble the reads they generated in the first part of the workshop in the > ipyrad ‘analysis’ API which provides a powerful, simple, and reproducible > interface to several widely used methods for inferring phylogenetic > relationships, population structure, and admixture. > > This workshop is intended as a bootcamp for early career students, > post-docs, or faculty to learn best practices that they can then help to > disseminate to the broader community. The workshop will be presented over > two weekends (September 14-15 and October 12-13) at Columbia University. > Participants can give a short research talk on October 12. The preliminary > schedule is available on the RADCamp website: > https://ift.tt/2G8mcE3. > > Participation will be limited to 30 individuals per weekend. Registration > for each weekend will be separate and preference will be given to > participants who can commit to attending both weekends.  We encourage all > scientists to submit their application. We especially welcome women and > under-represented minorities and early stage students, or early-career > faculty with the potential to pass on skills to large groups. Note that you > will be responsible for your own lodging, transportation, and meals.  We > will provide coffee and snacks during breaks.  Please only apply to the > workshop if you acknowledge that if accepted, you will commit logistically > and economically to attend.  A registration fee ($15 per weekend) will be > due upon acceptance. > > The application is available at > https://ift.tt/2YSNR3m. > The application deadline is August 1. > > RADCamp NYC is being organized and instruction will be provided by Dr. > Sandra Hoffberg (Columbia), Dr. Natalia Bayona Vásquez (UGA), Dr. Deren > Eaton (Columbia), Isaac Overcast (CCNY), and Dr. Laura Bertola (CCNY). > > --00000000000088f309058d558df0 > Content-Type: text/html; charset="UTF-8" > Content-Transfer-Encoding: quoted-printable > >

Call for participation in the 2nd New York Area RADCamp workshop presented by the Eaton Lab at Columbia University. This two-part workshop is designed to guide participants through a full RADseq pilot study, including library prep (lab methods), DNA sequencing, and bioinformatics. In Part I, we will introduce RADseq methods, explain common pitfalls, demonstrate, and generate 3RAD libraries. Participants will have the option of bringing 10-20 of their own extracted DNA samples and preparing libraries. Samples prepared during the workshop will be sent for paired-end Illumina sequencing to generate ~1M reads per sample.  The sequencing cost will be completely subsidized (free!) by generous funding from the Society for the Study of Evolution, the Society of Systematic Biologists, Columbia University, and The City College of New York. During the second weekend, we will introduce RADseq assembly in ipyrad, phylogenetic and population genetic methods, high per > formance computing, basic unix command line and python programming, and jupyter notebooks to promote reproducible science. Participants will have the opportunity to assemble the reads they generated in the first part of the workshop in the ipyrad ‘analysis’ API which provides a powerful, simple, and reproducible interface to several widely used methods for inferring phylogenetic relationships, population structure, and admixture.   This workshop is intended as a bootcamp for early career students, post-docs, or faculty to learn best practices that they can then help to disseminate to the broader community. The workshop will be presented over two weekends (September 14-15 and October 12-13) at Columbia University.  Participants can give a short research talk on October 12. The preliminary schedule is available on the RADCamp website: https://radcamp.github.io/NYC2019/. Participation will be limited to 30 in > dividuals per weekend. Registration for each weekend will be separate and preference will be given to participants who can commit to attending both weekends.  We encourage all scientists to submit their application. We especially welcome women and under-represented minorities and early stage students, or early-career faculty with the potential to pass on skills to large groups. Note that you will be responsible for your own lodging, transportation, and meals.  We will provide coffee and snacks during breaks.  Please only apply to the workshop if you acknowledge that if accepted, you will commit logistically and economically to attend.  A registration fee ($15 per weekend) will be due upon acceptance. The application is available at https://docs.google.com/forms/d/e/1FAIpQLSe_4qVhJbUbUuQwE71buxjmnzwZnDC544qCYL5M6EnSghWCDw/viewform.  The application dea > dline is August 1. RADCamp NYC is being organized and instruction will be provided by Dr. Sandra Hoffberg (Columbia), Dr. Natalia Bayona Vásquez (UGA), Dr. Deren Eaton (Columbia), Isaac Overcast (CCNY), and Dr. Laura Bertola (CCNY).

> > --00000000000088f309058d558df0-- > via IFTTT